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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
ChIP-seq
2
ATAC-seq
2
DNase-seq
1
FAIRE-seq
1
Hi-C
Assay category
17
DNA binding
5
DNA accessibility
1
3D chromatin structure
Target of assay
15
histone
15
histone modification
9
broad histone mark
6
narrow histone mark
2
control
Date released
206
May, 2021
147
May, 2020
134
May, 2022
88
February, 2023
73
September, 2018
59
August, 2017
59
September, 2020
48
February, 2021
48
July, 2018
43
April, 2018
42
June, 2019
24
July, 2019
23
October, 2019
9
November, 2017
8
January, 2021
7
August, 2020
6
November, 2020
5
December, 2019
5
September, 2017
4
August, 2021
3
August, 2018
3
June, 2018
3
October, 2022
2
October, 2018
1
March, 2020
1
March, 2023
1
November, 2018
Available data
22
bam
15
bed narrowPeak
15
bigWig
13
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
2
bed bed3+
1
hic
1
tar
Organism
23
Homo sapiens
Biosample type
238
tissue
23
primary cell
15
cell line
8
in vitro differentiated cells
Organ
33
epithelium
21
blood vessel
21
vasculature
21
vein
kidney
1
liver
Project
23
AMP
Genome assembly (visualization)
18
hg19
14
GRCh38
Lab
23
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
1
audit script error
organ_slims!
kidney
BIOSAMPLE
ASSAY
23 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
Hi-C
primary cell
endothelial cell of umbilical vein
17
2
1
1
Heart fetal (cardiac muscle cell)
1
Liver fetal (hepatocyte)
1
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