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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
115
ChIP-seq
40
single cell RNA-seq
16
total RNA-seq
3
ATAC-seq
Assay category
115
DNA binding
56
Transcription
3
DNA accessibility
Target of assay
89
histone
89
histone modification
56
broad histone mark
33
narrow histone mark
22
control
4
RNA binding protein
4
transcription factor
Date released
707
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
284
October, 2019
205
February, 2023
200
May, 2022
189
August, 2021
168
July, 2018
137
June, 2019
115
May, 2019
97
July, 2019
94
December, 2017
88
November, 2018
76
October, 2018
73
September, 2018
62
March, 2020
61
November, 2019
59
September, 2020
57
April, 2019
49
April, 2018
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
11
September, 2017
8
January, 2018
7
August, 2020
7
December, 2019
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
1
May, 2023
Available data
115
bam
96
bigWig
93
bed narrowPeak
93
bigBed narrowPeak
41
fastq
19
zippedFastqFolder
Organism
174
Homo sapiens
Biosample type
115
tissue
59
primary cell
Organ
50
blood vessel
50
vasculature
28
brain
24
epithelium
21
heart
21
pancreas
7
limb
7
musculature of body
5
artery
kidney
Project
115
AMP
59
HPAP
Genome assembly (visualization)
95
GRCh38
93
hg19
Lab
115
AMP-T2D consortium
59
Klaus Kaestner, Upenn
organ_slims!
kidney
BIOSAMPLE
ASSAY
174 results
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Clear Filters
ChIP-seq
single cell RNA-seq
total RNA-seq
ATAC-seq
tissue
ascending aorta
16
thoracic aorta
16
temporal lobe
15
angular gyrus
13
aorta
13
+ See 6 more…
primary cell
Langerhans cell
40
pancreatic alpha cell
15
2
pancreatic beta cell
1
1
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