Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
Hi-C
Assay category
20
3D chromatin structure
Date released
9
March, 2020
4
October, 2019
3
October, 2022
2
November, 2019
1
March, 2019
1
March, 2023
Available data
2567
bam
2376
bigWig
1402
tsv
1153
bed narrowPeak
893
fastq
580
bigBed narrowPeak
312
tagAlign
182
bed bed3+
181
bed broadPeak
153
zippedFastqFolder
144
bigBed broadPeak
99
txt
29
bed bedMethyl
29
bigBed bedMethyl
21
bedpe bed3+
20
hic
11
bed bed3
7
bed bedgraph
4
hdf5
3
cool
2
csv
2
ibed
1
bedpe
1
tagAlign bed3+
1
tar
Organism
20
Homo sapiens
Biosample type
9
tissue
6
primary cell
4
in vitro differentiated cells
1
cell line
Organ
7
pancreas
6
epithelium
3
blood vessel
3
heart
3
vasculature
liver
2
musculature of body
2
vein
kidney
Project
16
AMP
3
HPAP
1
ITG
Genome assembly (visualization)
19
hg19
1
GRCh38
Lab
15
AMP-T2D consortium
3
Klaus Kaestner, Upenn
1
Bing Ren, UCSD
1
ITG
Audit category:
5
inconsistent ontology term
4
audit script error
organ_slims!
kidney
liver
BIOSAMPLE
ASSAY
20 results
search-icon
table-tab-icon
Clear Filters
Hi-C
tissue
islet of Langerhans
2
psoas muscle
2
aorta
1
heart
1
heart left ventricle
1
+ See 2 more…
primary cell
endothelial cell of umbilical vein
2
chondrocytes
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
cardiac precursors (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
cell line
EndoC_BH1
1
See all biosamples
Download