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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
6
total RNA-seq
1
MPRA
1
snATAC-seq
Assay category
6
Transcription
1
DNA accessibility
Date released
84
February, 2021
February, 2023
7
May, 2022
1
October, 2022
Available data
3248
bam
3035
bigWig
1569
bed narrowPeak
1559
tsv
1282
fastq
938
bigBed narrowPeak
398
tagAlign
244
bed broadPeak
207
bigBed broadPeak
191
bed bed3+
153
zippedFastqFolder
92
txt
32
bed bedMethyl
32
bigBed bedMethyl
23
bedpe bed3+
22
hic
5
hdf5
4
bed bedgraph
4
tar
3
cool
3
csv
2
bed bed3
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
91
Homo sapiens
Biosample type
91
tissue
1
cell line
Organ
84
bone element
kidney
6
pancreas
1
musculature of body
Project
92
AMP
Genome assembly (visualization)
1
hg19
Lab
86
AMP-T2D consortium
6
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
1
audit script error
organ_slims!
kidney
spinal cord
month_released!
February, 2023
BIOSAMPLE
ASSAY
92 results
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RNA microarray
total RNA-seq
MPRA
snATAC-seq
tissue
bone element
84
islet of Langerhans
6
skeletal muscle tissue
1
cell line
MIN6
1
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