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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
Assay category
18
DNA binding
Target of assay
354
transcription factor
82
recombinant protein
80
control
RNA binding protein
38
histone
38
histone modification
30
chromatin remodeller
19
broad histone mark
19
narrow histone mark
3
nucleotide modification
2
other context
2
other post-translational modification
Date released
9
November, 2017
5
November, 2018
2
December, 2018
2
January, 2019
Available data
18
bam
18
bed narrowPeak
18
bigBed narrowPeak
18
bigWig
18
fastq
3
bed broadPeak
3
bigBed broadPeak
Organism
18
Homo sapiens
Biosample type
18
cell line
2
in vitro differentiated cells
2
tissue
Organ
13
liver
5
blood
5
bodily fluid
Project
18
AMP
Genome assembly (visualization)
18
hg19
17
GRCh38
Lab
18
AMP-T2D consortium
Audit category:
1
inconsistent control
Audit category:
4
missing controlled_by
Audit category:
6
inconsistent control read length
5
inconsistent control run_type
organ_slims!
kidney
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
18 results
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ChIP-seq
cell line
HepG2
13
GM12878
5
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