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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
299
ChIP-seq
Assay category
299
DNA binding
Target of assay
573
histone modification
572
histone
299
narrow histone mark
273
broad histone mark
181
control
88
transcription factor
22
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
127
October, 2019
50
August, 2017
33
May, 2019
28
November, 2017
27
May, 2020
15
April, 2019
11
October, 2018
2
December, 2017
2
January, 2019
2
March, 2020
2
October, 2017
Available data
243
bigWig
241
bed narrowPeak
233
bam
110
tagAlign
100
bigBed narrowPeak
28
fastq
15
bed broadPeak
6
bed bed3+
1
tagAlign bed3+
Organism
297
Homo sapiens
Biosample type
299
tissue
110
primary cell
55
in vitro differentiated cells
19
cell line
1
stem cell
Organ
114
brain
44
liver
32
pancreas
23
heart
18
blood vessel
18
vasculature
15
limb
13
connective tissue
12
adipose tissue
kidney
9
musculature of body
8
nerve
6
artery
4
gonad
4
ovary
2
eye
2
spleen
1
lymph node
1
pituitary gland
Project
297
AMP
2
T1D
Genome assembly (visualization)
229
hg19
226
GRCh38
Lab
299
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
4
missing controlled_by
Audit category:
3
inconsistent control read length
organ_slims!
kidney
BIOSAMPLE
ASSAY
299 results
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Clear Filters
ChIP-seq
tissue
liver
42
islet of Langerhans
37
subcutaneous abdominal adipose tissue
11
heart left ventricle
9
layer of hippocampus
8
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