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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
545
total RNA-seq
84
RNA microarray
27
snATAC-seq
22
ATAC-seq
18
single cell RNA-seq
8
ChIP-seq
6
WGBS
3
snDrop-seq
2
pCHi-C
Assay category
22
DNA accessibility
18
Transcription
Date released
182
August, 2021
111
May, 2022
104
February, 2023
100
May, 2020
48
July, 2018
47
September, 2023
43
April, 2018
43
September, 2020
40
February, 2021
34
May, 2021
26
November, 2019
22
October, 2019
15
September, 2018
14
May, 2023
9
April, 2020
9
July, 2019
8
October, 2017
7
August, 2020
5
August, 2017
5
September, 2017
4
March, 2019
4
March, 2020
3
August, 2018
3
December, 2019
3
January, 2018
3
June, 2018
1
November, 2018
1
November, 2020
Available data
18
bam
18
bed narrowPeak
12
fastq
6
csv
5
tsv
5
txt
4
bed bedgraph
2
bed bed3
1
bigWig
Organism
40
Homo sapiens
Biosample type
14
tissue
13
primary cell
9
cell line
4
in vitro differentiated cells
Organ
8
artery
8
blood vessel
8
bone element
8
heart
8
skeleton
8
vasculature
6
limb
5
connective tissue
5
kidney
2
liver
Project
28
AMP
12
HPAP
Genome assembly (visualization)
22
hg19
18
GRCh38
Lab
28
AMP-T2D consortium
12
Klaus Kaestner, Upenn
Audit category:
5
audit script error
1
inconsistent replicate
organ_slims!
large intestine
BIOSAMPLE
ASSAY
40 results
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Clear Filters
ATAC-seq
single cell RNA-seq
tissue
kidney
5
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
+ See 5 more…
primary cell
Langerhans cell
12
osteoblast
1
cell line
smooth muscle cell of the coronary artery
8
HepG2
1
in vitro differentiated cells
adipocyte
4
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