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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
ChIP-seq
Assay category
23
DNA binding
Target of assay
13
histone
13
histone modification
10
transcription factor
7
narrow histone mark
6
broad histone mark
2
chromatin remodeller
Date released
11
December, 2017
10
August, 2017
February, 2018
2
November, 2017
Available data
54
bam
54
bigWig
54
fastq
52
bed narrowPeak
bigBed narrowPeak
13
bed broadPeak
13
bigBed broadPeak
11
tagAlign
10
bed bed3+
Organism
23
Homo sapiens
Biosample type
15
in vitro differentiated cells
4
primary cell
2
cell line
2
stem cell
Organ
6
connective tissue
5
epithelium
4
pancreas
3
embryo
2
liver
Project
23
AMP
Genome assembly (visualization)
23
hg19
21
GRCh38
Lab
23
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
23
inconsistent control read length
1
inconsistent assembly
organ_slims!
large intestine
files.file_type!
bigBed narrowPeak
month_released!
February, 2018
BIOSAMPLE
ASSAY
23 results
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ChIP-seq
in vitro differentiated cells
adipocyte
6
Posterior foregut
2
definitive endodermal cell
2
pancreatic endoderm
2
primitive gut cell
2
+ See 1 more…
primary cell
pancreatic alpha cell
2
pancreatic beta cell
2
cell line
HepG2
2
stem cell
hESC
2
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