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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
89
total RNA-seq
9
WGBS
6
RRBS
5
ATAC-seq
4
DNase-seq
1
FAIRE-seq
Assay category
89
Transcription
15
DNA methylation
10
DNA accessibility
Date released
681
February, 2021
291
May, 2020
255
August, 2021
200
May, 2022
189
February, 2023
187
June, 2019
168
July, 2018
145
May, 2021
114
August, 2017
108
July, 2019
64
October, 2019
59
September, 2020
52
March, 2020
49
April, 2018
47
September, 2023
43
November, 2019
41
September, 2018
25
February, 2020
19
April, 2020
18
November, 2018
16
January, 2021
16
November, 2020
15
May, 2023
8
December, 2019
8
October, 2017
7
August, 2020
5
January, 2019
5
March, 2019
5
March, 2023
5
September, 2017
4
January, 2018
4
October, 2022
3
August, 2018
3
June, 2018
2
October, 2018
1
August, 2022
1
December, 2018
Available data
105
fastq
100
bam
100
bigWig
89
tsv
9
bed narrowPeak
9
bigBed narrowPeak
6
bed bedMethyl
6
bigBed bedMethyl
1
bed broadPeak
1
bigBed broadPeak
Organism
114
Homo sapiens
Biosample type
108
tissue
6
primary cell
in vitro differentiated cells
Organ
94
pancreas
7
adipose tissue
7
connective tissue
6
liver
4
musculature of body
3
epithelium
Project
114
AMP
Genome assembly (visualization)
102
hg19
97
GRCh38
Lab
114
AMP-T2D consortium
organ_slims!
large intestine
biosample_type!
in vitro differentiated cells
assay_title!
ChIP-seq
BIOSAMPLE
ASSAY
114 results
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Clear Filters
total RNA-seq
WGBS
RRBS
ATAC-seq
DNase-seq
FAIRE-seq
tissue
islet of Langerhans
89
1
1
liver
3
1
skeletal muscle tissue
4
adipose tissue
3
subcutaneous abdominal adipose tissue
3
+ See 2 more…
primary cell
skeletal muscle myoblast
1
2
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
See all biosamples
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