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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
3
single cell RNA-seq
Assay category
20
DNA binding
3
Transcription
Target of assay
759
histone modification
758
histone
468
transcription factor
398
narrow histone mark
359
broad histone mark
98
RNA binding protein
85
recombinant protein
36
chromatin remodeller
23
control
5
other context
5
other post-translational modification
Date released
16
November, 2017
3
July, 2019
3
May, 2021
1
August, 2017
Available data
29
bam
26
fastq
23
bigWig
bed bed3+
3
tsv
2
tagAlign
Organism
23
Homo sapiens
Biosample type
13
cell line
10
primary cell
Organ
13
liver
6
brain
2
epithelium
2
vasculature
1
blood vessel
Project
23
AMP
Genome assembly (visualization)
23
hg19
3
GRCh38
Lab
20
AMP-T2D consortium
3
Kyle Gaulton, UCSD
organ_slims!
large intestine
files.file_type!
bed bed3+
BIOSAMPLE
ASSAY
23 results
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ChIP-seq
single cell RNA-seq
cell line
HepG2
13
primary cell
CD8-positive, alpha-beta T cell
3
cerebellar granule cell
2
Purkinje cell
1
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
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