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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
546
ChIP-seq
189
total RNA-seq
23
ATAC-seq
5
WGBS
3
Hi-C
3
small RNA-seq
2
RRBS
2
STARR-seq
2
pCHi-C
1
DNase-seq
1
single cell RNA-seq
1
whole genome sequencing assay
Assay category
3
3D chromatin structure
Date released
1
August, 2021
1
December, 2018
1
March, 2020
Available data
2
bedpe bed3+
2
hic
bed bed3+
1
bigWig
1
fastq
1
hdf5
Organism
3
Homo sapiens
Biosample type
2
cell line
1
tissue
Organ
8
pancreas
6
epithelium
6
musculature of body
4
limb
3
blood vessel
3
heart
3
liver
3
vasculature
2
vein
1
kidney
Project
3
AMP
Genome assembly (visualization)
2
hg19
Lab
2
AMP-T2D consortium
1
Bing Ren, UCSD
organ_slims!
large intestine
files.file_type!
bed bed3+
BIOSAMPLE
ASSAY
3 results
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Hi-C
cell line
HepG2
2
tissue
liver
1
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