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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
total RNA-seq
3
Hi-C
Assay category
6
Transcription
3
3D chromatin structure
Date released
6
May, 2022
3
October, 2022
Available data
689
bam
623
bigWig
471
fastq
417
tsv
214
bed narrowPeak
91
bigBed narrowPeak
80
zippedFastqFolder
29
bed bed3+
21
bed broadPeak
19
tagAlign
7
bedpe bed3+
7
bigBed broadPeak
7
hic
6
bed bedMethyl
6
bigBed bedMethyl
6
txt
3
cool
1
bedpe
1
hdf5
Organism
9
Homo sapiens
Biosample type
6
tissue
3
primary cell
Organ
88
bone element
62
kidney
9
pancreas
4
skeleton
3
epithelium
1
musculature of body
Project
6
AMP
3
HPAP
Genome assembly (visualization)
3
hg19
Lab
6
Kyle Gaulton, UCSD
3
Klaus Kaestner, Upenn
Audit category:
3
audit script error
organ_slims!
large intestine
BIOSAMPLE
ASSAY
9 results
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total RNA-seq
Hi-C
tissue
islet of Langerhans
6
primary cell
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
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