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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
158
ChIP-seq
29
total RNA-seq
21
ATAC-seq
10
DNase-seq
5
Hi-C
4
pCHi-C
1
FAIRE-seq
Assay category
21
DNA accessibility
Date released
102
February, 2023
100
May, 2020
77
May, 2022
76
August, 2021
34
May, 2021
26
November, 2019
22
February, 2021
21
October, 2019
14
September, 2018
11
May, 2023
7
August, 2020
7
October, 2017
5
August, 2017
5
July, 2019
5
September, 2017
4
March, 2019
4
March, 2020
3
January, 2018
3
September, 2020
1
November, 2020
Available data
6
bam
6
bed narrowPeak
5
bigWig
3
bigBed narrowPeak
Organism
21
Homo sapiens
Biosample type
15
tissue
4
in vitro differentiated cells
2
primary cell
Organ
3
connective tissue
3
pancreas
2
limb
1
adipose tissue
1
artery
1
blood vessel
brain
1
epithelium
1
eye
1
liver
1
nerve
1
pituitary gland
1
skin of body
1
vasculature
Project
21
AMP
Genome assembly (visualization)
9
hg19
6
GRCh38
Lab
21
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
organ_slims!
large intestine
brain
BIOSAMPLE
ASSAY
21 results
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ATAC-seq
tissue
islet of Langerhans
12
adipose tissue
1
tibial artery
1
tibial nerve
1
in vitro differentiated cells
adipocyte
2
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
primary cell
Heart fetal (cardiac muscle cell)
1
Liver fetal (hepatocyte)
1
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