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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
48
ChIP-seq
3
DNase-seq
3
WGBS
1
ATAC-seq
1
RRBS
Assay category
48
DNA binding
4
DNA accessibility
4
DNA methylation
Target of assay
33
histone modification
32
histone
19
broad histone mark
13
narrow histone mark
11
control
4
transcription factor
Date released
315
November, 2017
194
May, 2020
63
December, 2017
54
August, 2017
53
November, 2018
40
May, 2022
35
August, 2021
10
July, 2019
7
October, 2019
5
December, 2019
5
January, 2019
3
February, 2021
3
March, 2020
2
June, 2019
1
December, 2018
1
February, 2020
Available data
28
bam
28
fastq
20
bed narrowPeak
20
bigWig
20
tagAlign
8
bigBed narrowPeak
5
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
56
Homo sapiens
Biosample type
54
tissue
2
primary cell
Organ
192
pancreas
143
connective tissue
81
kidney
69
musculature of body
58
adipose tissue
56
liver
49
epithelium
35
heart
32
limb
30
brain
18
ureter
7
eye
7
vasculature
5
blood vessel
2
artery
Project
56
AMP
Genome assembly (visualization)
22
hg19
21
GRCh38
Lab
56
AMP-T2D consortium
Audit category:
1
inconsistent control read length
organ_slims!
large intestine
BIOSAMPLE
ASSAY
56 results
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Clear Filters
ChIP-seq
DNase-seq
WGBS
ATAC-seq
RRBS
tissue
liver
48
3
1
right lobe of liver
1
1
primary cell
hepatic stellate cell
1
hepatocyte
1
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