Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
1
ATAC-seq
1
RRBS
1
pCHi-C
1
total RNA-seq
Assay category
14
DNA binding
1
DNA accessibility
1
DNA methylation
1
Transcription
Target of assay
6
histone
6
histone modification
5
control
4
broad histone mark
3
transcription factor
2
narrow histone mark
Date released
November, 2018
7
December, 2018
7
January, 2019
2
July, 2019
1
March, 2020
1
October, 2017
Available data
16
bam
15
fastq
11
bigWig
10
bed narrowPeak
9
bigBed narrowPeak
2
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
18
Homo sapiens
Biosample type
17
tissue
1
primary cell
Organ
939
pancreas
738
liver
683
connective tissue
524
epithelium
490
adipose tissue
393
heart
354
kidney
284
brain
236
vasculature
230
blood vessel
159
bone element
141
artery
122
limb
96
musculature of body
61
eye
54
blood
54
bodily fluid
43
nerve
37
embryo
22
vein
20
lung
18
ureter
16
skeleton
16
spleen
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
18
AMP
Genome assembly (visualization)
12
hg19
11
GRCh38
Lab
18
AMP-T2D consortium
organ_slims!
large intestine
month_released!
November, 2018
BIOSAMPLE
ASSAY
18 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
RRBS
pCHi-C
total RNA-seq
tissue
spleen
14
1
1
pericardium
1
primary cell
pericardium fibroblast
1
Download