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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
147
ChIP-seq
26
total RNA-seq
14
ATAC-seq
1
single cell RNA-seq
Assay category
147
DNA binding
27
Transcription
14
DNA accessibility
Target of assay
124
histone
124
histone modification
75
broad histone mark
49
narrow histone mark
23
control
RNA binding protein
5
transcription factor
Date released
715
February, 2021
403
August, 2017
394
May, 2021
369
November, 2017
341
May, 2020
318
August, 2021
314
October, 2019
214
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
115
May, 2019
108
July, 2019
90
December, 2017
76
April, 2019
73
September, 2018
67
November, 2018
65
October, 2018
63
March, 2020
60
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
May, 2024
33
December, 2018
25
February, 2020
24
January, 2019
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
187
bam
164
bigWig
138
bed narrowPeak
106
bigBed narrowPeak
73
fastq
26
tsv
1
csv
Organism
188
Homo sapiens
Biosample type
111
tissue
77
primary cell
Organ
74
pancreas
65
epithelium
47
blood vessel
47
vasculature
28
brain
19
heart
7
limb
7
musculature of body
4
artery
4
kidney
Project
188
AMP
Genome assembly (visualization)
164
hg19
163
GRCh38
Lab
188
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
32
missing controlled_by
organ_slims!
large intestine
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
188 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
single cell RNA-seq
tissue
ascending aorta
15
temporal lobe
15
thoracic aorta
15
angular gyrus
13
aorta
13
+ See 6 more…
primary cell
pancreatic ductal cell
13
4
4
pancreatic beta cell
10
4
pancreatic acinar cell
8
2
3
pancreatic alpha cell
10
3
pancreatic endocrine cell
11
+ See 2 more…
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