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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ChIP-seq
26
total RNA-seq
14
ATAC-seq
1
single cell RNA-seq
Assay category
28
DNA binding
27
Transcription
14
DNA accessibility
Target of assay
histone
124
histone modification
75
broad histone mark
49
narrow histone mark
23
control
5
RNA binding protein
5
transcription factor
Date released
715
February, 2021
318
November, 2017
314
May, 2020
299
August, 2021
259
May, 2021
213
August, 2017
205
February, 2023
200
May, 2022
199
June, 2019
168
July, 2018
118
October, 2019
108
July, 2019
88
November, 2018
63
December, 2017
60
March, 2020
59
September, 2020
51
November, 2019
49
April, 2018
47
September, 2023
46
October, 2018
41
September, 2018
35
December, 2018
28
May, 2019
25
February, 2020
23
February, 2018
23
January, 2019
20
April, 2019
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
October, 2017
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
5
May, 2024
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
68
bam
45
bigWig
41
fastq
26
tsv
19
bed narrowPeak
19
bigBed narrowPeak
1
csv
Organism
69
Homo sapiens
Biosample type
43
primary cell
26
tissue
Organ
42
epithelium
41
pancreas
14
blood vessel
14
vasculature
8
heart
3
artery
3
brain
2
kidney
1
limb
1
musculature of body
Project
69
AMP
Genome assembly (visualization)
45
GRCh38
45
hg19
Lab
69
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
large intestine
target.investigated_as!
histone
BIOSAMPLE
ASSAY
69 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
single cell RNA-seq
primary cell
pancreatic beta cell
10
4
pancreatic alpha cell
10
3
pancreatic ductal cell
4
4
pancreatic acinar cell
2
3
kidney epithelial cell
2
+ See 1 more…
tissue
thoracic aorta
5
ascending aorta
4
right atrium auricular region
4
coronary artery
3
aorta
2
+ See 6 more…
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