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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
155
DNase-seq
31
ChIP-seq
Assay category
155
DNA accessibility
31
DNA binding
Target of assay
19
histone
19
histone modification
11
narrow histone mark
8
broad histone mark
8
control
4
RNA binding protein
4
transcription factor
Date released
406
November, 2017
254
August, 2017
213
October, 2019
186
June, 2019
169
May, 2021
151
May, 2020
142
February, 2021
140
May, 2022
113
May, 2019
104
August, 2021
99
February, 2023
87
November, 2018
80
April, 2019
74
October, 2018
51
December, 2017
46
September, 2018
43
March, 2020
40
May, 2024
38
July, 2019
36
November, 2019
35
December, 2018
25
January, 2019
23
October, 2017
16
January, 2021
12
November, 2020
11
May, 2023
11
September, 2017
10
April, 2020
7
August, 2020
5
March, 2019
4
January, 2018
4
October, 2022
3
September, 2020
2
December, 2019
1
August, 2022
1
March, 2023
Available data
186
bam
178
bed narrowPeak
178
bigBed narrowPeak
178
bigWig
155
bed bed3+
155
bed broadPeak
155
bigBed broadPeak
Organism
186
Homo sapiens
Biosample type
131
tissue
55
primary cell
Organ
81
kidney
43
musculature of body
35
heart
limb
30
brain
20
epithelium
18
connective tissue
18
ureter
7
eye
7
vasculature
5
blood vessel
4
pancreas
2
artery
2
liver
1
adipose tissue
Project
186
AMP
Genome assembly (visualization)
178
GRCh38
155
hg19
Lab
186
AMP-T2D consortium
Audit category:
25
inconsistent ontology term
organ_slims!
limb
assay_slims!
Transcription
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
186 results
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DNase-seq
ChIP-seq
tissue
heart
18
kidney
13
brain
12
renal cortex interstitium
11
renal pelvis
10
+ See 30 more…
primary cell
cardiac fibroblast
3
5
skeletal muscle satellite cell
8
mesenchymal stem cell
7
cardiac muscle cell
1
3
epithelial cell of proximal tubule
1
3
+ See 17 more…
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