Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
298
ChIP-seq
174
single cell RNA-seq
132
total RNA-seq
102
ATAC-seq
87
RNA microarray
28
snATAC-seq
25
pCHi-C
12
Hi-C
11
RRBS
11
WGBS
4
FAIRE-seq
4
MeRIP-seq
3
snDrop-seq
1
DNase-seq
Assay category
132
Transcription
Date released
50
August, 2021
26
May, 2022
22
February, 2020
14
October, 2019
13
February, 2023
4
July, 2018
2
March, 2020
1
May, 2021
Available data
59
txt
27
tsv
6
bam
6
fastq
Organism
132
Homo sapiens
Biosample type
132
tissue
97
primary cell
9
cell line
9
in vitro differentiated cells
Organ
49
kidney
21
liver
20
pancreas
19
eye
12
brain
4
bone element
4
skeleton
3
blood vessel
3
heart
limb
3
vasculature
2
adipose tissue
2
artery
2
connective tissue
2
epithelium
2
musculature of body
1
nerve
1
spinal cord
Project
125
AMP
7
T1D
Genome assembly (visualization)
GRCh38
892
hg19
Lab
50
AMP-T2D consortium
49
Katalin Susztak, Upenn
20
Karen Mohlke, UNC
12
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
Audit category:
1
inconsistent ontology term
organ_slims!
limb
assembly!
GRCh38
BIOSAMPLE
ASSAY
132 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
tissue
kidney
49
islet of Langerhans
32
liver
20
retina
3
pigmented layer of retina
2
+ See 26 more…
See all biosamples
Download