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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
RRBS
15
WGBS
Assay category
32
DNA methylation
Date released
21
July, 2019
6
November, 2018
5
August, 2017
Available data
2596
bam
2455
bigWig
1419
tsv
1283
bed narrowPeak
892
fastq
599
bigBed narrowPeak
312
tagAlign
224
bed bed3+
223
bed broadPeak
186
bigBed broadPeak
161
txt
153
zippedFastqFolder
64
xls
32
bed bedMethyl
32
bigBed bedMethyl
21
bedpe bed3+
21
hic
11
bed bed3
7
bed bedgraph
7
csv
4
hdf5
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
tar
Organism
32
Homo sapiens
Biosample type
23
tissue
9
primary cell
Organ
8
heart
6
epithelium
6
pancreas
4
kidney
4
musculature of body
3
connective tissue
liver
2
adipose tissue
2
brain
2
spleen
2
vasculature
1
blood vessel
1
eye
limb
1
pericardium
Project
32
AMP
Genome assembly (visualization)
17
hg19
15
GRCh38
Lab
32
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
limb
liver
audit.ERROR.category!
inconsistent control
BIOSAMPLE
ASSAY
32 results
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RRBS
WGBS
tissue
heart left ventricle
1
2
pancreas
1
2
adipose tissue
2
body of pancreas
2
heart right ventricle
2
+ See 9 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
kidney epithelial cell
1
+ See 4 more…
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