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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
total RNA-seq
9
ATAC-seq
7
ChIP-seq
2
DNase-seq
Assay category
54
Transcription
11
DNA accessibility
7
DNA binding
Target of assay
5
transcription factor
2
histone
2
histone modification
2
narrow histone mark
1
RNA binding protein
Date released
64
February, 2021
3
July, 2019
3
May, 2019
2
June, 2019
Available data
72
bam
64
bigWig
54
tsv
18
bed narrowPeak
5
bigBed narrowPeak
4
tagAlign
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
72
Homo sapiens
Biosample type
64
cell line
6
tissue
2
primary cell
Organ
658
pancreas
624
liver
589
connective tissue
426
adipose tissue
311
epithelium
188
heart
165
vasculature
164
brain
159
blood vessel
129
kidney
limb
93
artery
73
musculature of body
70
bone element
55
blood
55
bodily fluid
34
eye
31
nerve
29
embryo
18
ureter
17
vein
14
spleen
12
skeleton
2
pericardium
1
pituitary gland
Project
72
AMP
Genome assembly (visualization)
107
GRCh38
72
hg19
Lab
72
AMP-T2D consortium
organ_slims!
limb
audit.ERROR.category!
inconsistent replicate
BIOSAMPLE
ASSAY
72 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
DNase-seq
cell line
smooth muscle cell of the coronary artery
52
8
4
tissue
coronary artery
1
3
2
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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