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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
294
ChIP-seq
Assay category
294
DNA binding
Target of assay
544
histone modification
543
histone
294
narrow histone mark
249
broad histone mark
170
control
89
transcription factor
23
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
116
October, 2019
50
August, 2017
31
May, 2019
28
November, 2017
27
May, 2020
23
April, 2019
11
October, 2018
2
December, 2017
2
January, 2019
2
March, 2020
2
October, 2017
Available data
239
bigWig
237
bed narrowPeak
229
bam
110
tagAlign
94
bigBed narrowPeak
28
fastq
15
bed broadPeak
6
bed bed3+
1
tagAlign bed3+
Organism
292
Homo sapiens
Biosample type
294
tissue
115
primary cell
55
in vitro differentiated cells
19
cell line
1
stem cell
Organ
114
brain
44
liver
32
pancreas
23
heart
18
blood vessel
18
vasculature
limb
13
connective tissue
12
adipose tissue
10
kidney
9
musculature of body
8
nerve
6
artery
4
gonad
4
ovary
2
eye
2
spleen
1
lymph node
1
pituitary gland
Project
292
AMP
2
T1D
Genome assembly (visualization)
225
hg19
223
GRCh38
Lab
294
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
4
missing controlled_by
Audit category:
3
inconsistent control read length
organ_slims!
limb
BIOSAMPLE
ASSAY
294 results
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Clear Filters
ChIP-seq
tissue
liver
42
islet of Langerhans
36
subcutaneous abdominal adipose tissue
11
kidney
10
heart left ventricle
9
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