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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
ChIP-seq
5
MeRIP-seq
Assay category
5
DNA binding
Target of assay
968
histone modification
967
histone
514
transcription factor
499
narrow histone mark
467
broad histone mark
326
control
114
RNA binding protein
89
recombinant protein
36
chromatin remodeller
5
nucleotide modification
5
other context
5
other post-translational modification
Date released
5
November, 2020
3
November, 2018
2
November, 2017
Available data
5
bam
5
bed narrowPeak
5
bigBed narrowPeak
5
bigWig
5
fastq
1
bed broadPeak
1
bigBed broadPeak
Organism
10
Homo sapiens
Biosample type
5
cell line
5
tissue
Organ
5
pancreas
3
epithelium
3
spleen
2
liver
Project
10
AMP
Genome assembly (visualization)
5
GRCh38
5
hg19
Lab
5
AMP-T2D consortium
5
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
3
inconsistent ontology term
organ_slims!
limb
files.file_type!
bed bedgraph
BIOSAMPLE
ASSAY
10 results
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Clear Filters
ChIP-seq
MeRIP-seq
cell line
EndoC_BH1
3
HepG2
2
tissue
spleen
3
islet of Langerhans
2
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