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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
57
WGBS
17
RRBS
1
DNAme array
Assay category
1540
Transcription
908
DNA binding
686
DNA accessibility
75
DNA methylation
29
3D chromatin structure
1
DNA sequencing
Date released
41
May, 2022
26
July, 2019
7
August, 2017
1
May, 2021
Available data
41
zippedFastqFolder
35
bed bedMethyl
35
bigBed bedMethyl
fastq
17
bam
16
bigWig
6
tsv
Organism
75
Homo sapiens
Biosample type
51
primary cell
24
tissue
Organ
47
epithelium
43
pancreas
10
heart
4
connective tissue
4
kidney
4
liver
4
musculature of body
3
adipose tissue
3
vasculature
2
blood vessel
2
brain
1
eye
limb
1
pericardium
Project
41
HPAP
34
AMP
Genome assembly (visualization)
15
hg19
7
GRCh38
Lab
41
Klaus Kaestner, Upenn
34
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
limb
files.file_type!
fastq
BIOSAMPLE
ASSAY
75 results
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WGBS
RRBS
DNAme array
primary cell
pancreatic alpha cell
25
pancreatic beta cell
16
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
+ See 7 more…
tissue
heart left ventricle
4
1
subcutaneous abdominal adipose tissue
3
aorta
2
heart right ventricle
2
liver
2
+ See 9 more…
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