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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
123
ChIP-seq
Assay category
123
DNA binding
Target of assay
297
control
123
histone
123
histone modification
62
broad histone mark
61
narrow histone mark
6
transcription factor
5
nucleotide modification
3
RNA binding protein
1
recombinant protein
Date released
76
August, 2017
26
October, 2019
May, 2021
13
November, 2017
6
October, 2017
1
August, 2021
1
December, 2017
Available data
bigWig
687
bed narrowPeak
651
bam
343
bigBed narrowPeak
236
tagAlign
230
fastq
65
bed broadPeak
30
bigBed broadPeak
25
bed bed3+
1
tagAlign bed3+
Organism
123
Homo sapiens
Biosample type
105
tissue
14
in vitro differentiated cells
3
primary cell
1
cell line
Organ
43
connective tissue
30
adipose tissue
21
brain
20
liver
9
pancreas
6
musculature of body
4
gonad
4
ovary
3
blood vessel
3
epithelium
3
vasculature
3
vein
2
eye
1
embryo
limb
1
lymph node
Project
123
AMP
Genome assembly (visualization)
3
GRCh38
2
hg19
Lab
123
AMP-T2D consortium
Audit category:
2
missing controlled_by
organ_slims!
limb
month_released!
May, 2021
files.file_type!
bigWig
BIOSAMPLE
ASSAY
123 results
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ChIP-seq
tissue
subcutaneous abdominal adipose tissue
30
islet of Langerhans
28
liver
20
brain
6
cingulate gyrus
6
+ See 7 more…
in vitro differentiated cells
adipocyte
12
neural progenitor cell
1
pancreatic endoderm
1
primary cell
endothelial cell of umbilical vein
3
cell line
Panc1
1
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