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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
RRBS
7
WGBS
Assay category
22
DNA methylation
Date released
22
July, 2019
Available data
3202
bam
2991
bigWig
1640
bed narrowPeak
1591
tsv
fastq
913
bigBed narrowPeak
398
tagAlign
286
bed broadPeak
249
bigBed broadPeak
237
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
35
bed bedMethyl
35
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
22
Homo sapiens
Biosample type
13
tissue
9
primary cell
Organ
8
heart
6
epithelium
4
kidney
2
brain
2
musculature of body
2
pancreas
2
vasculature
1
blood vessel
1
connective tissue
1
eye
limb
1
liver
1
pericardium
Project
22
AMP
Genome assembly (visualization)
15
hg19
7
GRCh38
Lab
22
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
limb
month_released!
October, 2018
files.file_type!
fastq
BIOSAMPLE
ASSAY
22 results
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RRBS
WGBS
tissue
heart left ventricle
1
2
heart right ventricle
2
aorta
1
brain
1
heart
1
+ See 5 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 4 more…
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