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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
2
Capture-C
Assay category
18
DNA binding
Target of assay
13
histone
13
histone modification
7
narrow histone mark
6
broad histone mark
5
control
Date released
155
June, 2019
33
August, 2017
15
December, 2017
9
November, 2018
5
August, 2021
4
February, 2023
4
July, 2019
4
October, 2019
2
February, 2021
2
May, 2021
2
September, 2017
1
May, 2022
1
November, 2020
Available data
178
bed narrowPeak
143
bam
123
tsv
119
bigWig
94
fastq
64
xls
57
txt
50
bigBed narrowPeak
24
tagAlign
20
bed bed3+
2
bedpe bed3+
2
hic
1
vcf
Organism
20
Homo sapiens
Biosample type
14
in vitro differentiated cells
3
primary cell
3
stem cell
Organ
3
embryo
3
epithelium
3
liver
2
connective tissue
Project
20
AMP
Genome assembly (visualization)
20
hg19
18
GRCh38
Lab
18
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
Audit category:
6
inconsistent control read length
organ_slims!
limb
BIOSAMPLE
ASSAY
20 results
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ChIP-seq
Capture-C
in vitro differentiated cells
Posterior foregut
3
definitive endodermal cell
3
pancreatic endoderm
3
primitive gut cell
3
adipocyte
1
+ See 1 more…
primary cell
hepatocyte
3
stem cell
hESC
3
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