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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
44
total RNA-seq
small RNA-seq
15
RRBS
11
WGBS
6
ATAC-seq
4
Hi-C
3
single cell RNA-seq
2
FAIRE-seq
Assay category
47
Transcription
26
DNA methylation
8
DNA accessibility
4
3D chromatin structure
Target of assay
3
control
Date released
709
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
245
October, 2019
205
February, 2023
200
May, 2022
186
June, 2019
168
July, 2018
113
May, 2019
94
December, 2017
88
November, 2018
85
July, 2019
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
October, 2017
22
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
66
bigWig
63
bam
47
tsv
22
bed bedMethyl
22
bigBed bedMethyl
7
bed narrowPeak
4
bed bed3+
4
hdf5
2
bigBed narrowPeak
Organism
85
Homo sapiens
Biosample type
56
tissue
29
primary cell
Organ
24
heart
15
connective tissue
14
brain
13
epithelium
12
vasculature
11
blood vessel
10
kidney
9
adipose tissue
8
musculature of body
7
liver
limb
4
pancreas
3
artery
2
pericardium
1
eye
Project
85
AMP
Genome assembly (visualization)
73
hg19
60
GRCh38
Lab
85
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
limb
month_released!
October, 2017
assay_title!
small RNA-seq
BIOSAMPLE
ASSAY
85 results
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total RNA-seq
RRBS
WGBS
ATAC-seq
Hi-C
single cell RNA-seq
FAIRE-seq
tissue
heart left ventricle
2
1
4
2
omental fat pad
4
subcutaneous adipose tissue
4
heart
2
1
right atrium auricular region
2
1
+ See 23 more…
primary cell
cerebellar granule cell
2
epithelial cell of proximal tubule
1
1
kidney epithelial cell
1
1
renal cortical epithelial cell
1
1
Purkinje cell
1
+ See 20 more…
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