Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
156
DNase-seq
31
ChIP-seq
10
MeRIP-seq
4
total RNA-seq
1
ATAC-seq
Assay category
157
DNA accessibility
31
DNA binding
4
Transcription
Target of assay
19
histone
19
histone modification
13
control
11
narrow histone mark
8
broad histone mark
5
nucleotide modification
4
RNA binding protein
4
transcription factor
Date released
709
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
245
October, 2019
205
February, 2023
200
May, 2022
186
June, 2019
168
July, 2018
113
May, 2019
103
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
23
October, 2017
22
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
192
bam
183
bigWig
180
bed narrowPeak
179
bigBed narrowPeak
156
bed bed3+
156
bed broadPeak
156
bigBed broadPeak
4
tsv
Organism
202
Homo sapiens
Biosample type
135
tissue
61
primary cell
6
cell line
Organ
81
kidney
43
musculature of body
35
heart
limb
30
brain
26
epithelium
24
connective tissue
18
ureter
14
pancreas
7
eye
7
vasculature
5
blood vessel
2
artery
2
liver
1
adipose tissue
Project
202
AMP
Genome assembly (visualization)
184
GRCh38
161
hg19
Lab
192
AMP-T2D consortium
10
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
31
inconsistent ontology term
organ_slims!
limb
BIOSAMPLE
ASSAY
202 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
ChIP-seq
MeRIP-seq
total RNA-seq
ATAC-seq
tissue
heart
18
kidney
13
brain
12
renal cortex interstitium
11
renal pelvis
10
+ See 31 more…
primary cell
cardiac fibroblast
3
5
skeletal muscle satellite cell
8
mesenchymal stem cell
7
osteoblast
1
4
1
cardiac muscle cell
1
3
+ See 18 more…
cell line
EndoC_BH1
6
See all biosamples
Download