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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
2
Hi-C
1
whole genome sequencing assay
Assay category
2
3D chromatin structure
1
DNA sequencing
Date released
2
August, 2021
1
March, 2020
Available data
681
bam
622
bigWig
465
fastq
441
bed narrowPeak
358
bigBed narrowPeak
174
tsv
86
tagAlign
63
bed broadPeak
63
bigBed broadPeak
13
bed bed3+
3
bed bedMethyl
3
bigBed bedMethyl
3
tar
2
bedpe bed3+
2
hic
1
bed bed3
1
csv
1
hdf5
1
vcf
Organism
3
Homo sapiens
Biosample type
2
cell line
1
tissue
Organ
7
pancreas
5
epithelium
3
heart
3
liver
2
blood vessel
2
musculature of body
2
vasculature
1
adipose tissue
1
connective tissue
1
vein
Project
3
AMP
Genome assembly (visualization)
2
hg19
Lab
2
Bing Ren, UCSD
1
AMP-T2D consortium
organ_slims!
limb
BIOSAMPLE
ASSAY
3 results
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Hi-C
whole genome sequencing assay
cell line
HepG2
1
1
tissue
liver
1
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