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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
49
ChIP-seq
Assay category
49
DNA binding
Target of assay
49
histone
49
histone modification
44
transcription factor
28
broad histone mark
21
narrow histone mark
4
RNA binding protein
4
chromatin remodeller
1
other context
1
other post-translational modification
Date released
26
August, 2017
20
November, 2017
3
October, 2017
Available data
591
bigWig
587
bed narrowPeak
534
bam
296
bigBed narrowPeak
223
tagAlign
157
fastq
49
bed broadPeak
22
bed bed3+
14
bigBed broadPeak
1
tagAlign bed3+
Organism
43
Homo sapiens
Biosample type
35
tissue
primary cell
14
cell line
Organ
14
liver
13
musculature of body
12
pancreas
9
brain
1
adipose tissue
1
connective tissue
Project
49
AMP
Genome assembly (visualization)
49
hg19
26
GRCh38
Lab
49
AMP-T2D consortium
Audit category:
2
missing controlled_by
Audit category:
11
inconsistent control read length
1
inconsistent assembly
organ_slims!
limb
biosample_type!
primary cell
BIOSAMPLE
ASSAY
49 results
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Clear Filters
ChIP-seq
tissue
skeletal muscle tissue
13
islet of Langerhans
6
pancreas
6
brain
3
cingulate gyrus
2
+ See 4 more…
cell line
HepG2
14
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