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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
ATAC-seq
Assay category
7
DNA accessibility
Date released
4
February, 2021
3
February, 2023
Available data
2710
bam
2543
bigWig
1426
tsv
1376
bed narrowPeak
892
fastq
684
bigBed narrowPeak
312
tagAlign
258
bed broadPeak
256
bed bed3+
222
bigBed broadPeak
161
txt
153
zippedFastqFolder
64
xls
33
bed bedMethyl
33
bigBed bedMethyl
11
bed bed3
7
bed bedgraph
7
csv
3
bedpe bed3+
2
ibed
1
tagAlign bed3+
1
tar
Organism
7
Homo sapiens
Biosample type
7
in vitro differentiated cells
Organ
4
connective tissue
Project
7
AMP
Genome assembly (visualization)
7
hg19
Lab
4
AMP-T2D consortium
3
Struan F.A. Grant, CHOP
Audit category:
1
inconsistent ontology term
organ_slims!
liver
assay_slims!
3D chromatin structure
lab.title!
Mark McCarthy, Oxford
BIOSAMPLE
ASSAY
7 results
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ATAC-seq
in vitro differentiated cells
adipocyte
4
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
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