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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
ChIP-seq
26
total RNA-seq
16
snATAC-seq
14
ATAC-seq
1
single cell RNA-seq
Assay category
32
DNA binding
30
DNA accessibility
27
Transcription
Target of assay
32
histone
32
histone modification
17
broad histone mark
15
narrow histone mark
Date released
711
February, 2021
382
May, 2021
357
August, 2017
303
October, 2019
284
August, 2021
216
June, 2019
205
February, 2023
168
July, 2018
160
May, 2022
147
May, 2020
120
May, 2019
98
July, 2019
91
November, 2017
80
April, 2019
76
October, 2018
73
September, 2018
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
November, 2018
34
December, 2018
31
December, 2017
30
March, 2020
25
January, 2019
24
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
March, 2019
5
March, 2023
4
October, 2022
3
August, 2018
3
June, 2018
1
August, 2022
Available data
73
fastq
72
bam
72
bigWig
46
bed narrowPeak
26
tsv
14
bigBed narrowPeak
1
csv
Organism
89
Homo sapiens
Biosample type
81
primary cell
8
tissue
Organ
80
pancreas
61
epithelium
8
blood
8
bodily fluid
Project
73
AMP
16
T1D
Genome assembly (visualization)
72
GRCh38
72
hg19
Lab
73
AMP-T2D consortium
16
Kyle Gaulton, UCSD
Audit category:
32
missing controlled_by
organ_slims!
liver
assay_title!
pCHi-C
BIOSAMPLE
ASSAY
89 results
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Clear Filters
ChIP-seq
total RNA-seq
snATAC-seq
ATAC-seq
single cell RNA-seq
primary cell
pancreatic ductal cell
13
4
4
pancreatic beta cell
10
4
pancreatic acinar cell
8
2
3
pancreatic alpha cell
10
3
pancreatic endocrine cell
11
+ See 2 more…
tissue
islet of Langerhans
4
pancreas
4
See all biosamples
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