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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
ChIP-seq
6
DNase-seq
6
WGBS
5
ATAC-seq
1
FAIRE-seq
1
single cell RNA-seq
Assay category
27
DNA binding
12
DNA accessibility
6
DNA methylation
1
Transcription
Target of assay
15
transcription factor
12
control
3
other context
3
other post-translational modification
2
RNA binding protein
2
chromatin remodeller
Date released
711
February, 2021
382
May, 2021
357
August, 2017
303
October, 2019
284
August, 2021
216
June, 2019
205
February, 2023
168
July, 2018
160
May, 2022
147
May, 2020
120
May, 2019
98
July, 2019
91
November, 2017
80
April, 2019
76
October, 2018
73
September, 2018
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
November, 2018
34
December, 2018
31
December, 2017
30
March, 2020
25
January, 2019
24
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
March, 2019
5
March, 2023
4
October, 2022
3
August, 2018
3
June, 2018
1
August, 2022
Available data
46
fastq
45
bam
33
bigWig
27
bed narrowPeak
27
bigBed narrowPeak
8
bed bed3+
6
bed bedMethyl
6
bed broadPeak
6
bigBed bedMethyl
6
bigBed broadPeak
1
csv
Organism
46
Homo sapiens
Biosample type
25
tissue
15
cell line
6
primary cell
Organ
liver
18
pancreas
15
blood
15
bodily fluid
9
spleen
5
epithelium
2
brain
1
adipose tissue
1
connective tissue
Project
46
AMP
Genome assembly (visualization)
34
GRCh38
29
hg19
Lab
46
AMP-T2D consortium
organ_slims!
liver
assay_title!
pCHi-C
BIOSAMPLE
ASSAY
46 results
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Clear Filters
ChIP-seq
DNase-seq
WGBS
ATAC-seq
FAIRE-seq
single cell RNA-seq
tissue
spleen
6
1
2
islet of Langerhans
6
body of pancreas
2
2
pancreas
2
1
brain
2
+ See 1 more…
cell line
GM12878
15
primary cell
pancreatic alpha cell
2
pancreatic beta cell
2
pancreatic acinar cell
1
pancreatic cell
1
See all biosamples
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