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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
237
ChIP-seq
29
total RNA-seq
21
ATAC-seq
10
DNase-seq
5
Hi-C
4
pCHi-C
1
FAIRE-seq
Assay category
237
DNA binding
Target of assay
191
histone
191
histone modification
139
narrow histone mark
52
broad histone mark
39
control
7
recombinant protein
7
transcription factor
Date released
248
August, 2017
237
October, 2019
165
May, 2021
120
May, 2019
91
November, 2017
80
April, 2019
74
October, 2018
34
December, 2018
32
September, 2018
31
December, 2017
31
June, 2019
25
January, 2019
24
February, 2018
21
August, 2021
21
November, 2018
15
October, 2017
13
November, 2019
8
February, 2021
6
September, 2017
3
March, 2020
Available data
214
bam
171
bigWig
169
bed narrowPeak
58
bigBed narrowPeak
49
tagAlign
2
bed broadPeak
2
bigBed broadPeak
1
tagAlign bed3+
Organism
237
Homo sapiens
Biosample type
190
tissue
24
primary cell
23
cell line
Organ
84
brain
59
limb
40
blood vessel
40
vasculature
35
nerve
24
epithelium
23
artery
21
kidney
17
vein
13
pancreas
5
heart
liver
4
gonad
4
ovary
2
eye
1
connective tissue
1
lymph node
1
pituitary gland
Project
237
AMP
Genome assembly (visualization)
173
hg19
171
GRCh38
Lab
237
AMP-T2D consortium
Audit category:
12
inconsistent ontology term
organ_slims!
liver
BIOSAMPLE
ASSAY
237 results
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Clear Filters
ChIP-seq
tissue
tibial nerve
35
tibial artery
23
islet of Langerhans
21
brain
5
heart
5
+ See 76 more…
primary cell
endothelial cell of umbilical vein
17
epithelial cell of proximal tubule
7
cell line
Panc1
13
RCC 7860 HIF1a re-expression
4
RCC 7860 HIF2a over-expression
3
RCC 7860 vector
3
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