Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1101
ChIP-seq
941
total RNA-seq
356
ATAC-seq
288
single cell RNA-seq
198
DNase-seq
87
RNA microarray
73
snATAC-seq
53
pCHi-C
21
Hi-C
19
WGBS
17
RRBS
13
small RNA-seq
5
GRO-seq
3
CRISPR genome editing followed by DNA sequencing
3
FAIRE-seq
3
STARR-seq
3
snDrop-seq
2
Capture-C
2
HiChIP
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
Assay category
19
DNA methylation
Date released
11
July, 2019
6
August, 2017
2
November, 2018
Available data
13
bam
12
bed bedMethyl
12
bigBed bedMethyl
12
bigWig
5
fastq
Organism
19
Homo sapiens
Biosample type
19
tissue
Organ
pancreas
47
epithelium
8
heart
6
adipose tissue
6
connective tissue
liver
2
blood vessel
2
spleen
2
vasculature
1
limb
1
musculature of body
Project
19
AMP
Genome assembly (visualization)
12
GRCh38
Lab
19
AMP-T2D consortium
organ_slims!
liver
pancreas
BIOSAMPLE
ASSAY
19 results
search-icon
table-tab-icon
Clear Filters
WGBS
tissue
heart left ventricle
4
adipose tissue
3
subcutaneous abdominal adipose tissue
3
aorta
2
heart right ventricle
2
+ See 4 more…
See all biosamples
Download