Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
134
ChIP-seq
93
single cell RNA-seq
72
total RNA-seq
47
ATAC-seq
30
DNase-seq
8
WGBS
3
Hi-C
3
pCHi-C
2
RRBS
1
small RNA-seq
Assay category
134
DNA binding
1
Transcription
Target of assay
97
histone
97
histone modification
57
broad histone mark
40
narrow histone mark
20
control
17
transcription factor
11
RNA binding protein
Date released
57
April, 2019
40
May, 2024
21
May, 2019
6
February, 2021
5
June, 2019
5
October, 2019
1
July, 2019
Available data
115
bigWig
114
bed narrowPeak
94
bam
64
bigBed narrowPeak
6
tagAlign
1
tsv
Organism
135
Homo sapiens
Biosample type
124
tissue
6
cell line
5
primary cell
Organ
liver
222
brain
220
pancreas
156
connective tissue
135
heart
129
epithelium
102
vasculature
99
blood vessel
76
adipose tissue
66
limb
60
blood
60
bodily fluid
53
kidney
41
musculature of body
35
nerve
34
artery
22
embryo
20
spleen
17
vein
5
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
135
AMP
Genome assembly (visualization)
114
GRCh38
75
hg19
Lab
95
AMP-T2D consortium
40
Patrick T. Ellinor, Broad
Audit category:
4
inconsistent ontology term
organ_slims!
liver
BIOSAMPLE
ASSAY
135 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
small RNA-seq
tissue
left cardiac atrium
40
heart left ventricle
35
heart
14
1
heart right ventricle
13
right atrium auricular region
10
+ See 2 more…
cell line
smooth muscle cell of the coronary artery
6
primary cell
cardiac fibroblast
5
See all biosamples
Download