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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1220
ChIP-seq
1214
total RNA-seq
467
ATAC-seq
353
single cell RNA-seq
202
DNase-seq
84
snATAC-seq
70
WGBS
45
pCHi-C
25
Hi-C
17
RRBS
15
small RNA-seq
5
FAIRE-seq
5
GRO-seq
4
MeRIP-seq
3
CRISPR genome editing followed by DNA sequencing
3
RNA microarray
3
snDrop-seq
2
Capture-C
2
HiChIP
2
STARR-seq
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
Date released
2
December, 2019
1
August, 2021
Available data
2
tsv
Organism
2
Homo sapiens
Biosample type
3
tissue
Organ
2
kidney
1
adipose tissue
1
connective tissue
1
epithelium
Project
3
AMP
Lab
3
AMP-T2D consortium
Audit category:
inconsistent ontology term
2
audit script error
organ_slims!
liver
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
3 results
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RNA microarray
tissue
kidney interstitium
1
renal glomerulus
1
subcutaneous adipose tissue
1
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