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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
76
ChIP-seq
Assay category
76
DNA binding
Target of assay
39
control
37
histone
37
histone modification
22
broad histone mark
15
narrow histone mark
Date released
27
August, 2017
21
November, 2017
9
October, 2019
8
October, 2017
7
August, 2021
3
February, 2021
1
May, 2021
Available data
2711
bam
bigWig
1426
tsv
1336
bed narrowPeak
893
fastq
684
bigBed narrowPeak
312
tagAlign
260
bed bed3+
259
bed broadPeak
222
bigBed broadPeak
161
txt
153
zippedFastqFolder
64
xls
33
bed bedMethyl
33
bigBed bedMethyl
21
bedpe bed3+
21
hic
11
bed bed3
7
bed bedgraph
7
csv
4
hdf5
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
tar
Organism
75
Homo sapiens
Biosample type
51
tissue
22
in vitro differentiated cells
3
cell line
Organ
liver
36
brain
21
connective tissue
7
adipose tissue
5
pancreas
2
artery
2
blood vessel
2
epithelium
2
heart
2
musculature of body
2
vasculature
Project
76
AMP
Genome assembly (visualization)
1
GRCh38
Lab
76
AMP-T2D consortium
Audit category:
1
missing controlled_by
organ_slims!
liver
files.file_type!
bigWig
BIOSAMPLE
ASSAY
76 results
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Clear Filters
ChIP-seq
tissue
brain
8
cingulate gyrus
8
subcutaneous abdominal adipose tissue
7
layer of hippocampus
4
substantia nigra
4
+ See 14 more…
in vitro differentiated cells
adipocyte
14
neural progenitor cell
7
pancreatic PP cell
1
cell line
smooth muscle cell of the coronary artery
2
iPSC derived cell line
1
See all biosamples
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