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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ChIP-seq
6
DNase-seq
6
WGBS
1
FAIRE-seq
1
single cell RNA-seq
Assay category
21
DNA binding
7
DNA accessibility
6
DNA methylation
1
Transcription
Target of assay
15
transcription factor
6
control
3
other context
3
other post-translational modification
2
RNA binding protein
2
chromatin remodeller
Date released
292
October, 2019
268
August, 2017
226
May, 2021
216
June, 2019
189
February, 2023
170
August, 2021
160
May, 2022
153
February, 2021
120
May, 2019
102
May, 2020
91
November, 2017
80
April, 2019
74
October, 2018
59
September, 2020
47
September, 2018
47
September, 2023
41
November, 2019
40
July, 2019
35
November, 2018
34
December, 2018
31
December, 2017
25
January, 2019
24
February, 2018
23
October, 2017
19
April, 2020
18
March, 2020
16
January, 2021
15
May, 2023
12
November, 2020
11
September, 2017
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
July, 2018
4
October, 2022
1
August, 2018
1
August, 2022
1
December, 2019
Available data
35
fastq
34
bam
28
bigWig
22
bed narrowPeak
22
bigBed narrowPeak
6
bed bed3+
6
bed bedMethyl
6
bed broadPeak
6
bigBed bedMethyl
6
bigBed broadPeak
1
csv
Organism
35
Homo sapiens
Biosample type
19
tissue
15
cell line
1
primary cell
Organ
liver
15
blood
15
bodily fluid
9
spleen
7
pancreas
2
brain
1
adipose tissue
1
connective tissue
Project
35
AMP
Genome assembly (visualization)
27
GRCh38
22
hg19
Lab
35
AMP-T2D consortium
organ_slims!
liver
files.file_type!
tsv
BIOSAMPLE
ASSAY
35 results
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Clear Filters
ChIP-seq
DNase-seq
WGBS
FAIRE-seq
single cell RNA-seq
tissue
spleen
6
1
2
body of pancreas
2
2
pancreas
2
1
brain
2
omental fat pad
1
cell line
GM12878
15
primary cell
pancreatic cell
1
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