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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
204
DNase-seq
172
ATAC-seq
5
FAIRE-seq
Assay category
1244
Transcription
1068
DNA binding
381
DNA accessibility
17
DNA methylation
Date released
185
June, 2019
45
May, 2020
26
November, 2019
18
May, 2022
17
February, 2021
14
October, 2019
14
September, 2018
13
May, 2021
10
August, 2021
9
August, 2017
8
July, 2019
7
November, 2018
7
October, 2017
5
September, 2017
2
November, 2020
1
March, 2019
Available data
464
bed narrowPeak
381
bam
324
bigWig
235
bigBed narrowPeak
204
bed bed3+
203
bed broadPeak
201
bigBed broadPeak
98
fastq
64
xls
60
zippedFastqFolder
14
tsv
11
bed bed3
7
bed bedgraph
4
txt
1
tar
Organism
381
Homo sapiens
Biosample type
241
tissue
111
primary cell
18
in vitro differentiated cells
11
cell line
Organ
80
kidney
75
pancreas
44
limb
42
epithelium
42
heart
35
brain
33
musculature of body
23
vasculature
21
blood vessel
18
ureter
14
artery
14
connective tissue
8
bone element
liver
8
skeleton
5
adipose tissue
4
eye
3
nerve
3
vein
2
spleen
Project
381
AMP
Genome assembly (visualization)
355
hg19
310
GRCh38
Lab
362
AMP-T2D consortium
18
Kyle Gaulton, UCSD
1
Mark McCarthy, Oxford
Audit category:
18
inconsistent ontology term
organ_slims!
liver
BIOSAMPLE
ASSAY
381 results
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Clear Filters
DNase-seq
ATAC-seq
FAIRE-seq
tissue
islet of Langerhans
1
38
1
heart
18
muscle of arm
17
brain
14
kidney
13
1
+ See 50 more…
primary cell
monocyte
15
pancreatic beta cell
7
pancreatic alpha cell
6
pancreatic acinar cell
5
pancreatic ductal cell
4
+ See 46 more…
in vitro differentiated cells
neural progenitor cell
10
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
adipocyte
1
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
cell line
smooth muscle cell of the coronary artery
8
EndoC_BH1
1
Panc1
1
glomerular visceral epithelial cell
1
See all biosamples
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