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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
RRBS
16
WGBS
7
single cell RNA-seq
Assay category
33
DNA methylation
7
Transcription
Date released
22
July, 2019
7
November, 2018
5
August, 2017
5
February, 2021
1
September, 2018
Available data
2711
bam
2507
bigWig
1426
tsv
1336
bed narrowPeak
893
fastq
684
bigBed narrowPeak
312
tagAlign
260
bed bed3+
259
bed broadPeak
222
bigBed broadPeak
161
txt
153
zippedFastqFolder
64
xls
33
bed bedMethyl
33
bigBed bedMethyl
21
bedpe bed3+
21
hic
11
bed bed3
7
bed bedgraph
7
csv
4
hdf5
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
tar
Organism
40
Homo sapiens
Biosample type
29
tissue
11
primary cell
Organ
9
kidney
8
heart
6
epithelium
6
pancreas
liver
4
musculature of body
3
connective tissue
2
adipose tissue
2
brain
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
40
AMP
Genome assembly (visualization)
17
hg19
16
GRCh38
Lab
40
AMP-T2D consortium
Audit category:
5
audit script error
2
inconsistent ontology term
organ_slims!
liver
BIOSAMPLE
ASSAY
40 results
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RRBS
WGBS
single cell RNA-seq
tissue
kidney
1
5
heart left ventricle
1
2
pancreas
1
2
adipose tissue
2
body of pancreas
2
+ See 10 more…
primary cell
pancreatic cell
2
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
+ See 5 more…
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