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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
2
ATAC-seq
2
ChIP-seq
Assay category
2
DNA accessibility
2
DNA binding
Target of assay
2
broad histone mark
2
histone
2
histone modification
Date released
2
October, 2019
1
March, 2019
1
October, 2017
Available data
2711
bam
2507
bigWig
1426
tsv
bed narrowPeak
893
fastq
684
bigBed narrowPeak
312
tagAlign
260
bed bed3+
259
bed broadPeak
222
bigBed broadPeak
161
txt
153
zippedFastqFolder
64
xls
33
bed bedMethyl
33
bigBed bedMethyl
21
bedpe bed3+
21
hic
11
bed bed3
7
bed bedgraph
7
csv
4
hdf5
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
tar
Organism
4
Homo sapiens
Biosample type
2
primary cell
2
tissue
Organ
liver
2
blood vessel
2
epithelium
2
pancreas
2
vasculature
2
vein
Project
4
AMP
Genome assembly (visualization)
3
hg19
1
GRCh38
Lab
2
AMP-T2D consortium
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
organ_slims!
liver
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
4 results
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ATAC-seq
ChIP-seq
primary cell
endothelial cell of umbilical vein
2
tissue
islet of Langerhans
2
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