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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
238
total RNA-seq
128
single cell RNA-seq
Assay category
405
DNA binding
366
Transcription
98
DNA accessibility
18
3D chromatin structure
18
DNA methylation
Date released
89
August, 2017
76
February, 2023
50
July, 2018
44
April, 2018
38
September, 2020
27
September, 2018
15
February, 2018
12
February, 2021
6
May, 2022
3
August, 2018
3
June, 2018
2
October, 2018
1
November, 2018
Available data
1372
tsv
1244
bam
1240
bigWig
366
fastq
72
txt
52
zippedFastqFolder
7
csv
2
bed bed3+
0
bedpe bed3+
Organism
366
Homo sapiens
Biosample type
248
primary cell
103
tissue
15
in vitro differentiated cells
Organ
253
pancreas
147
epithelium
liver
4
embryo
3
connective tissue
Project
240
AMP
126
HPAP
Genome assembly (visualization)
232
GRCh38
232
hg19
Lab
234
AMP-T2D consortium
126
Klaus Kaestner, Upenn
6
Kyle Gaulton, UCSD
Audit category:
7
inconsistent ontology term
organ_slims!
liver
BIOSAMPLE
ASSAY
366 results
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total RNA-seq
single cell RNA-seq
primary cell
pancreatic alpha cell
52
12
exocrine cell
39
Langerhans cell
34
pancreatic beta cell
21
12
pancreatic acinar cell
4
9
+ See 13 more…
tissue
islet of Langerhans
103
in vitro differentiated cells
pancreatic endoderm
4
definitive endodermal cell
2
embryonic stem cell
2
endocrine cell
2
posterior foregut
2
+ See 2 more…
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