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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
405
ChIP-seq
238
total RNA-seq
128
single cell RNA-seq
60
ATAC-seq
27
snATAC-seq
15
WGBS
9
DNase-seq
5
GRO-seq
4
Hi-C
3
RRBS
2
FAIRE-seq
1
pCHi-C
Assay category
4
3D chromatin structure
Date released
3
July, 2019
1
October, 2019
Available data
21
hic
18
bedpe bed3+
4
bed bed3+
4
bigWig
4
hdf5
3
cool
1
bedpe
0
fastq
Organism
4
Homo sapiens
Biosample type
3
primary cell
1
cell line
Organ
3
brain
2
blood vessel
2
epithelium
liver
2
vasculature
1
connective tissue
1
pancreas
Project
4
AMP
Genome assembly (visualization)
4
hg19
1
GRCh38
Lab
4
AMP-T2D consortium
Audit category:
1
inconsistent assembly
organ_slims!
liver
BIOSAMPLE
ASSAY
4 results
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Hi-C
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
cell line
Panc1
1
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