Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
Hi-C
Assay category
5
3D chromatin structure
Date released
3
July, 2019
1
March, 2019
1
October, 2019
Available data
2711
bam
2507
bigWig
1426
tsv
1336
bed narrowPeak
893
fastq
684
bigBed narrowPeak
312
tagAlign
260
bed bed3+
259
bed broadPeak
222
bigBed broadPeak
161
txt
153
zippedFastqFolder
64
xls
33
bed bedMethyl
33
bigBed bedMethyl
21
bedpe bed3+
21
hic
11
bed bed3
7
bed bedgraph
7
csv
4
hdf5
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
tar
Organism
5
Homo sapiens
Biosample type
3
primary cell
1
cell line
1
tissue
Organ
3
brain
2
blood vessel
2
epithelium
2
pancreas
2
vasculature
1
connective tissue
liver
Project
5
AMP
Genome assembly (visualization)
5
hg19
1
GRCh38
Lab
4
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
1
inconsistent assembly
organ_slims!
liver
BIOSAMPLE
ASSAY
5 results
search-icon
table-tab-icon
Clear Filters
Hi-C
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
cell line
Panc1
1
tissue
islet of Langerhans
1
Download