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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
45
ATAC-seq
34
ChIP-seq
2
DNase-seq
Assay category
47
DNA accessibility
34
DNA binding
Target of assay
20
histone
20
histone modification
14
broad histone mark
9
control
6
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
35
February, 2023
26
October, 2019
14
February, 2021
5
May, 2019
June, 2019
1
July, 2019
Available data
100
bam
83
bigWig
72
bed narrowPeak
tsv
23
bigBed narrowPeak
6
tagAlign
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
81
Homo sapiens
Biosample type
67
tissue
14
cell line
Organ
liver
525
pancreas
348
epithelium
249
kidney
230
brain
190
heart
188
connective tissue
161
vasculature
157
blood vessel
101
bone element
89
adipose tissue
83
limb
81
artery
69
blood
69
bodily fluid
49
eye
44
musculature of body
38
nerve
24
spleen
23
embryo
22
vein
19
lung
16
skeleton
4
gonad
4
ovary
2
pituitary gland
1
bone marrow
1
lymph node
1
pericardium
1
skin of body
1
thymus
Project
81
AMP
Genome assembly (visualization)
72
GRCh38
37
hg19
Lab
81
AMP-T2D consortium
organ_slims!
liver
month_released!
June, 2019
files.file_type!
tsv
BIOSAMPLE
ASSAY
81 results
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ATAC-seq
ChIP-seq
DNase-seq
tissue
coronary artery
36
5
tibial artery
1
23
2
cell line
smooth muscle cell of the coronary artery
8
6
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