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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
ATAC-seq
Assay category
11
DNA accessibility
Date released
10
February, 2023
1
February, 2021
Available data
2683
bam
2515
bigWig
1383
tsv
1360
bed narrowPeak
880
fastq
673
bigBed narrowPeak
312
tagAlign
260
bed bed3+
258
bed broadPeak
221
bigBed broadPeak
161
txt
153
zippedFastqFolder
64
xls
33
bed bedMethyl
33
bigBed bedMethyl
12
hic
11
bed bed3
10
bedpe bed3+
7
bed bedgraph
7
csv
4
hdf5
3
cool
1
bedpe
1
tagAlign bed3+
1
tar
Organism
11
Homo sapiens
Biosample type
5
in vitro differentiated cells
5
tissue
1
primary cell
Organ
6
connective tissue
4
bone element
4
skeleton
1
brain
liver
Project
11
AMP
Genome assembly (visualization)
11
hg19
1
GRCh38
Lab
11
AMP-T2D consortium
organ_slims!
liver
month_released!
March, 2020
target.investigated_as!
chromatin remodeller
BIOSAMPLE
ASSAY
11 results
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ATAC-seq
in vitro differentiated cells
chondrocyte
5
tissue
acetabular part of hip bone
1
brain
1
ilium
1
ischium
1
pubis
1
primary cell
osteoblast
1
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