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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
24
ChIP-seq
15
total RNA-seq
3
single cell RNA-seq
1
RNA microarray
Assay category
24
DNA binding
18
Transcription
Target of assay
16
histone
16
histone modification
8
broad histone mark
8
control
8
narrow histone mark
Date released
680
February, 2021
373
May, 2021
328
August, 2017
282
August, 2021
273
October, 2019
197
June, 2019
153
February, 2023
147
May, 2020
135
July, 2018
115
May, 2019
87
July, 2019
85
November, 2017
80
April, 2019
80
May, 2022
74
October, 2018
55
March, 2020
47
September, 2023
45
November, 2019
40
May, 2024
40
September, 2020
39
February, 2018
35
November, 2018
34
December, 2018
27
December, 2017
25
January, 2019
24
February, 2020
23
October, 2017
19
April, 2020
16
April, 2018
16
January, 2021
15
May, 2023
12
September, 2018
10
November, 2020
8
January, 2018
6
September, 2017
5
March, 2019
5
March, 2023
4
December, 2019
2
June, 2018
1
August, 2018
1
August, 2022
1
October, 2022
Available data
39
bam
39
fastq
31
bigWig
18
tsv
16
bed narrowPeak
Organism
43
Homo sapiens
Biosample type
41
in vitro differentiated cells
2
tissue
Organ
13
embryo
epithelium
liver
3
kidney
Project
43
AMP
Genome assembly (visualization)
31
GRCh38
31
hg19
Lab
43
AMP-T2D consortium
Audit category:
3
audit script error
2
inconsistent ontology term
Audit category:
2
inconsistent control read length
organ_slims!
liver
epithelium
BIOSAMPLE
ASSAY
43 results
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Clear Filters
ChIP-seq
total RNA-seq
single cell RNA-seq
RNA microarray
in vitro differentiated cells
pancreatic endoderm
9
4
definitive endodermal cell
3
2
embryonic stem cell
3
2
endocrine cell
3
2
posterior foregut
3
2
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tissue
kidney
1
kidney interstitium
1
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