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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
545
total RNA-seq
84
RNA microarray
27
snATAC-seq
21
ATAC-seq
17
single cell RNA-seq
8
ChIP-seq
6
WGBS
3
snDrop-seq
1
pCHi-C
Assay category
21
DNA accessibility
17
Transcription
Date released
182
August, 2021
104
February, 2023
100
May, 2020
91
May, 2022
49
April, 2018
48
July, 2018
47
September, 2023
43
September, 2020
38
February, 2021
34
May, 2021
26
November, 2019
21
October, 2019
15
September, 2018
14
May, 2023
9
April, 2020
9
July, 2019
8
October, 2017
7
August, 2020
5
September, 2017
4
August, 2017
4
March, 2019
4
March, 2020
3
August, 2018
3
December, 2019
3
January, 2018
3
June, 2018
1
November, 2018
1
November, 2020
Available data
17
bam
17
bed narrowPeak
12
fastq
5
csv
5
tsv
5
txt
4
bed bedgraph
1
bed bed3
1
bigWig
Organism
38
Homo sapiens
Biosample type
13
primary cell
13
tissue
8
cell line
4
in vitro differentiated cells
Organ
8
artery
8
blood vessel
8
bone element
8
heart
8
skeleton
8
vasculature
6
limb
5
connective tissue
5
kidney
liver
Project
26
AMP
12
HPAP
Genome assembly (visualization)
21
hg19
17
GRCh38
Lab
26
AMP-T2D consortium
12
Klaus Kaestner, Upenn
Audit category:
5
audit script error
organ_slims!
liver
BIOSAMPLE
ASSAY
38 results
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ATAC-seq
single cell RNA-seq
primary cell
Langerhans cell
12
osteoblast
1
tissue
kidney
5
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
+ See 4 more…
cell line
smooth muscle cell of the coronary artery
8
in vitro differentiated cells
adipocyte
4
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